Kingdom
Bacillati
Phylum
Bacillota
Class
Erysipelotrichia
Order
Erysipelotrichales
Family
Erysipelotrichaceae
Genus
Holdemanella
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Erysipelotrichia |
| Order | Erysipelotrichales |
| Family | Erysipelotrichaceae |
| Genus | Holdemanella |
| Species | Holdemanella biformis |
| Strain | strain AF10-31 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | feces |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
820351 bp
Thymine Count
835766 bp
Guanine Count
430183 bp
Cytosine Count
431129 bp
Genome Length
2518124 bp
Protein-coding Genes
2385 genes
Non-Coding Genes
60 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DWV56_10400 | Not Available | Positive | 2082434 - 2083024 | 22263.6 |
| hypothetical protein | DWV56_10405 | Not Available | Positive | 2083112 - 2083729 | 23992.0 |
| cupin domain-containing protein | DWV56_10410 | Not Available | Positive | 2083856 - 2084389 | 19949.9 |
| abc transporter atp-binding protein | DWV56_10415 | Not Available | Positive | 2084410 - 2085993 | 60128.6 |
| abc transporter permease | DWV56_10420 | Not Available | Positive | 2085997 - 2086824 | 31273.7 |
| extracellular solute-binding protein | DWV56_10425 | Not Available | Positive | 2086827 - 2088713 | 70051.2 |
| l-ribulose-5-phosphate 4-epimerase | DWV56_10430 | Not Available | Negative | 2088893 - 2089572 | 25238.9 |
| hypothetical protein | DWV56_10435 | Not Available | Negative | 2089576 - 2090610 | 38733.9 |
| pts sugar transporter subunit iib | DWV56_10440 | Not Available | Negative | 2090679 - 2090975 | 10474.0 |
| pts ascorbate transporter subunit iic | DWV56_10445 | Not Available | Negative | 2090990 - 2092456 | 53585.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
