Kingdom
Bacillati
Phylum
Bacillota
Class
Erysipelotrichia
Order
Erysipelotrichales
Family
Erysipelotrichaceae
Genus
Holdemanella
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Erysipelotrichia |
| Order | Erysipelotrichales |
| Family | Erysipelotrichaceae |
| Genus | Holdemanella |
| Species | Holdemanella biformis |
| Strain | strain AF10-31 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | feces |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
820351 bp
Thymine Count
835766 bp
Guanine Count
430183 bp
Cytosine Count
431129 bp
Genome Length
2518124 bp
Protein-coding Genes
2385 genes
Non-Coding Genes
60 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DWV56_10030 | Not Available | Positive | 2009117 - 2010670 | 59658.5 |
| rela/spot domain protein | DWV56_10035 | Not Available | Positive | 2010728 - 2011249 | 20137.2 |
| dna-binding response regulator | DWV56_10040 | Not Available | Positive | 2011251 - 2011919 | 25493.1 |
| dna-binding response regulator | DWV56_10045 | Not Available | Positive | 2011943 - 2012620 | 25569.1 |
| sensor histidine kinase | DWV56_10050 | Not Available | Positive | 2012613 - 2013845 | 46720.4 |
| aminopeptidase p family protein | DWV56_10055 | Not Available | Positive | 2013856 - 2014929 | 40376.5 |
| trna uridine-5-carboxymethylaminomethyl(34) synthesis gtpase mnme | DWV56_10060 | Not Available | Negative | 2014947 - 2016275 | 49560.6 |
| threonylcarbamoyl-amp synthase | DWV56_10065 | Not Available | Positive | 2016318 - 2016944 | 22909.8 |
| hypothetical protein | DWV56_10070 | Not Available | Positive | 2017132 - 2017380 | 9646.8 |
| Trna-leu | Not Available | Not Available | Positive | 2017466 - 2017549 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
