Kingdom
Bacillati
Phylum
Bacillota
Class
Erysipelotrichia
Order
Erysipelotrichales
Family
Erysipelotrichaceae
Genus
Holdemanella
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Erysipelotrichia |
| Order | Erysipelotrichales |
| Family | Erysipelotrichaceae |
| Genus | Holdemanella |
| Species | Holdemanella biformis |
| Strain | strain AF10-31 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | feces |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
820351 bp
Thymine Count
835766 bp
Guanine Count
430183 bp
Cytosine Count
431129 bp
Genome Length
2518124 bp
Protein-coding Genes
2385 genes
Non-Coding Genes
60 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transketolase family protein | DWV56_09865 | Not Available | Positive | 1977262 - 1978185 | 33557.7 |
| type ii toxin-antitoxin system hica family toxin | DWV56_09870 | Not Available | Positive | 1978354 - 1978617 | 10258.4 |
| toxin-antitoxin system hicb family antitoxin | DWV56_09875 | Not Available | Positive | 1978619 - 1979116 | 18553.1 |
| hypothetical protein | DWV56_09880 | Not Available | Positive | 1979126 - 1979512 | 14576.5 |
| acylphosphatase | DWV56_09885 | Not Available | Negative | 1979569 - 1979892 | 12439.0 |
| prd domain-containing protein | DWV56_09890 | Not Available | Positive | 1980170 - 1982134 | 76958.1 |
| pts fructose transporter subunit iia | DWV56_09895 | Not Available | Positive | 1982148 - 1982597 | 16694.9 |
| pts fructose transporter subunit iib | DWV56_09900 | Not Available | Positive | 1982852 - 1983169 | 11392.9 |
| pts fructose transporter subunit iic | DWV56_09905 | Not Available | Positive | 1983197 - 1984291 | 37840.6 |
| class ii fructose-bisphosphate aldolase | DWV56_09910 | Not Available | Positive | 1984325 - 1985179 | 31543.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
