Kingdom
Bacillati
Phylum
Bacillota
Class
Erysipelotrichia
Order
Erysipelotrichales
Family
Erysipelotrichaceae
Genus
Holdemanella
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Erysipelotrichia |
| Order | Erysipelotrichales |
| Family | Erysipelotrichaceae |
| Genus | Holdemanella |
| Species | Holdemanella biformis |
| Strain | strain AF10-31 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | feces |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
820351 bp
Thymine Count
835766 bp
Guanine Count
430183 bp
Cytosine Count
431129 bp
Genome Length
2518124 bp
Protein-coding Genes
2385 genes
Non-Coding Genes
60 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| holliday junction branch migration dna helicase ruvb | DWV56_09810 | Not Available | Negative | 1969467 - 1970477 | 37771.3 |
| holliday junction branch migration protein ruva | DWV56_09815 | Not Available | Negative | 1970483 - 1971061 | 21520.3 |
| exodeoxyribonuclease iii | DWV56_09820 | Not Available | Negative | 1971063 - 1971812 | 29168.5 |
| gtpase obge | DWV56_09825 | Not Available | Negative | 1971873 - 1973153 | 47229.3 |
| 50s ribosomal protein l27 | DWV56_09830 | Not Available | Negative | 1973218 - 1973502 | 10153.3 |
| ribosomal-processing cysteine protease prp | DWV56_09835 | Not Available | Negative | 1973506 - 1973820 | 11433.8 |
| 50s ribosomal protein l21 | DWV56_09840 | Not Available | Negative | 1973823 - 1974125 | 11174.6 |
| peptidase s51 | DWV56_09845 | Not Available | Negative | 1974334 - 1974936 | 22205.7 |
| had family phosphatase | DWV56_09855 | Not Available | Positive | 1975558 - 1976445 | 34020.9 |
| transketolase | DWV56_09860 | Not Available | Positive | 1976447 - 1977265 | 30215.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
