Kingdom
Bacillati
Phylum
Bacillota
Class
Erysipelotrichia
Order
Erysipelotrichales
Family
Erysipelotrichaceae
Genus
Holdemanella
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Erysipelotrichia |
| Order | Erysipelotrichales |
| Family | Erysipelotrichaceae |
| Genus | Holdemanella |
| Species | Holdemanella biformis |
| Strain | strain AF10-31 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | feces |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
820351 bp
Thymine Count
835766 bp
Guanine Count
430183 bp
Cytosine Count
431129 bp
Genome Length
2518124 bp
Protein-coding Genes
2385 genes
Non-Coding Genes
60 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| restriction endonuclease subunit m | DWV56_09705 | Not Available | Negative | 1948144 - 1949982 | 70541.3 |
| giy-yig nuclease family protein | DWV56_09710 | Not Available | Negative | 1950082 - 1950912 | 31335.2 |
| atp-binding protein | DWV56_09715 | Not Available | Negative | 1950935 - 1952278 | 51563.3 |
| tnpv protein | DWV56_09720 | Not Available | Negative | 1952689 - 1953039 | 13375.1 |
| xre family transcriptional regulator | DWV56_09725 | Not Available | Negative | 1953074 - 1953451 | 14204.2 |
| hypothetical protein | DWV56_09735 | Not Available | Negative | 1953647 - 1953853 | 7880.62 |
| rida family protein | DWV56_09740 | Not Available | Negative | 1953844 - 1954272 | 15539.4 |
| duf87 domain-containing protein | DWV56_09745 | Not Available | Negative | 1954297 - 1956642 | 87418.1 |
| rnase j family beta-casp ribonuclease | DWV56_09750 | Not Available | Negative | 1956657 - 1958348 | 63969.4 |
| trna (n6-isopentenyl adenosine(37)-c2)-methylthiotransferase miab | DWV56_09755 | Not Available | Negative | 1958388 - 1959821 | 54438.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
