Kingdom
Bacillati
Phylum
Bacillota
Class
Erysipelotrichia
Order
Erysipelotrichales
Family
Erysipelotrichaceae
Genus
Holdemanella
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Erysipelotrichia |
| Order | Erysipelotrichales |
| Family | Erysipelotrichaceae |
| Genus | Holdemanella |
| Species | Holdemanella biformis |
| Strain | strain AF10-31 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | feces |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
820351 bp
Thymine Count
835766 bp
Guanine Count
430183 bp
Cytosine Count
431129 bp
Genome Length
2518124 bp
Protein-coding Genes
2385 genes
Non-Coding Genes
60 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| xre family transcriptional regulator | DWV56_09650 | Not Available | Negative | 1934032 - 1934670 | 24872.5 |
| duf3990 domain-containing protein | DWV56_09655 | Not Available | Negative | 1934636 - 1935328 | 26612.5 |
| atp-dependent helicase | DWV56_09660 | Not Available | Positive | 1935610 - 1938189 | 99303.1 |
| hypothetical protein | DWV56_09665 | Not Available | Positive | 1938193 - 1938924 | 27741.5 |
| marr family transcriptional regulator | DWV56_09675 | Not Available | Negative | 1940752 - 1941174 | 16600.2 |
| diguanylate cyclase | DWV56_09680 | Not Available | Positive | 1941153 - 1944011 | 109370.0 |
| atp-binding protein | DWV56_09685 | Not Available | Negative | 1944043 - 1945296 | 48454.5 |
| sis domain-containing protein | DWV56_09690 | Not Available | Negative | 1945452 - 1946522 | 40631.4 |
| gntr family transcriptional regulator | DWV56_09695 | Not Available | Negative | 1946541 - 1947263 | 27987.4 |
| gntr family transcriptional regulator | DWV56_09700 | Not Available | Negative | 1947266 - 1947976 | 27674.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
