Kingdom
Bacillati
Phylum
Bacillota
Class
Erysipelotrichia
Order
Erysipelotrichales
Family
Erysipelotrichaceae
Genus
Holdemanella
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Erysipelotrichia |
| Order | Erysipelotrichales |
| Family | Erysipelotrichaceae |
| Genus | Holdemanella |
| Species | Holdemanella biformis |
| Strain | strain AF10-31 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | feces |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
820351 bp
Thymine Count
835766 bp
Guanine Count
430183 bp
Cytosine Count
431129 bp
Genome Length
2518124 bp
Protein-coding Genes
2385 genes
Non-Coding Genes
60 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tyrosine recombinase | DWV56_09495 | Not Available | Negative | 1906442 - 1907401 | 37485.4 |
| methyltransferase domain-containing protein | DWV56_09500 | Not Available | Negative | 1907365 - 1908039 | 26461.8 |
| dna polymerase iv | DWV56_09505 | Not Available | Negative | 1908015 - 1909184 | 44131.4 |
| dna repair protein recn | DWV56_09510 | Not Available | Negative | 1909177 - 1910811 | 61729.9 |
| tlya family rna methyltransferase | DWV56_09515 | Not Available | Negative | 1910917 - 1911648 | 27219.1 |
| 1-deoxy-d-xylulose-5-phosphate synthase | DWV56_09520 | Not Available | Negative | 1911641 - 1913503 | 69124.4 |
| polyprenyl synthetase family protein | DWV56_09525 | Not Available | Negative | 1913592 - 1914440 | 31335.7 |
| exodeoxyribonuclease vii small subunit | DWV56_09530 | Not Available | Negative | 1914427 - 1914636 | 8049.73 |
| exodeoxyribonuclease vii large subunit | DWV56_09535 | Not Available | Negative | 1914638 - 1915969 | 50482.4 |
| transcription antitermination factor nusb | DWV56_09540 | Not Available | Negative | 1915966 - 1916343 | 14428.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
