Kingdom
Bacillati
Phylum
Bacillota
Class
Erysipelotrichia
Order
Erysipelotrichales
Family
Erysipelotrichaceae
Genus
Holdemanella
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Erysipelotrichia |
| Order | Erysipelotrichales |
| Family | Erysipelotrichaceae |
| Genus | Holdemanella |
| Species | Holdemanella biformis |
| Strain | strain AF10-31 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | feces |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
820351 bp
Thymine Count
835766 bp
Guanine Count
430183 bp
Cytosine Count
431129 bp
Genome Length
2518124 bp
Protein-coding Genes
2385 genes
Non-Coding Genes
60 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DWV56_08895 | Not Available | Positive | 1791005 - 1792558 | 59675.8 |
| atp-binding protein | DWV56_08900 | Not Available | Positive | 1792645 - 1794033 | 53598.0 |
| sis domain-containing protein | DWV56_08905 | Not Available | Positive | 1794197 - 1795231 | 39901.8 |
| had family phosphatase | DWV56_08910 | Not Available | Positive | 1795298 - 1795969 | 25552.7 |
| pts system fructose subfamily transporter subunit iia | DWV56_08915 | Not Available | Positive | 1796115 - 1796528 | 15101.2 |
| pts mannose/fructose/sorbose transporter subunit iib | DWV56_08920 | Not Available | Positive | 1796549 - 1797019 | 17317.1 |
| pts sugar transporter subunit iic | DWV56_08925 | Not Available | Positive | 1797041 - 1797817 | 27561.7 |
| pts system mannose/fructose/sorbose family transporter subunit iid | DWV56_08930 | Not Available | Positive | 1797807 - 1798634 | 30091.4 |
| aspartate--trna ligase | DWV56_08935 | Not Available | Negative | 1798837 - 1800573 | 66022.1 |
| histidine--trna ligase | DWV56_08940 | Not Available | Negative | 1800576 - 1801886 | 50110.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
