Kingdom
Bacillati
Phylum
Bacillota
Class
Erysipelotrichia
Order
Erysipelotrichales
Family
Erysipelotrichaceae
Genus
Holdemanella
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Erysipelotrichia |
| Order | Erysipelotrichales |
| Family | Erysipelotrichaceae |
| Genus | Holdemanella |
| Species | Holdemanella biformis |
| Strain | strain AF10-31 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | feces |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
820351 bp
Thymine Count
835766 bp
Guanine Count
430183 bp
Cytosine Count
431129 bp
Genome Length
2518124 bp
Protein-coding Genes
2385 genes
Non-Coding Genes
60 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| csor family transcriptional regulator | DWV56_08840 | Not Available | Positive | 1777065 - 1777358 | 11082.5 |
| heavy metal translocating p-type atpase | DWV56_08845 | Not Available | Positive | 1777368 - 1780076 | 97698.5 |
| pts glucose transporter subunit iia | DWV56_08855 | Not Available | Positive | 1780790 - 1781272 | 18302.9 |
| prd domain-containing protein | DWV56_08860 | Not Available | Positive | 1781277 - 1782134 | 33071.5 |
| pts glucose transporter subunit iib | DWV56_08865 | Not Available | Positive | 1782163 - 1783545 | 49095.4 |
| translation initiation factor eif-2b | DWV56_08870 | Not Available | Positive | 1783551 - 1784510 | 35967.5 |
| is110 family transposase | DWV56_08875 | Not Available | Negative | 1784680 - 1785864 | 44784.4 |
| pseudouridine-5'-phosphate glycosidase | DWV56_08880 | Not Available | Positive | 1786140 - 1787078 | 34366.7 |
| 8-oxo-dgtp diphosphatase mutt | DWV56_08885 | Not Available | Negative | 1787619 - 1788005 | 14670.6 |
| duf3427 domain-containing protein | DWV56_08890 | Not Available | Negative | 1788018 - 1790912 | 111070.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
