Kingdom
Bacillati
Phylum
Bacillota
Class
Erysipelotrichia
Order
Erysipelotrichales
Family
Erysipelotrichaceae
Genus
Holdemanella
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Erysipelotrichia |
| Order | Erysipelotrichales |
| Family | Erysipelotrichaceae |
| Genus | Holdemanella |
| Species | Holdemanella biformis |
| Strain | strain AF10-31 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | feces |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
820351 bp
Thymine Count
835766 bp
Guanine Count
430183 bp
Cytosine Count
431129 bp
Genome Length
2518124 bp
Protein-coding Genes
2385 genes
Non-Coding Genes
60 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| s-ribosylhomocysteine lyase | DWV56_08530 | Not Available | Negative | 1722038 - 1722514 | 18014.5 |
| a/g-specific adenine glycosylase | DWV56_08535 | Not Available | Negative | 1722502 - 1723488 | 38289.5 |
| class i mannose-6-phosphate isomerase | DWV56_08540 | Not Available | Negative | 1723509 - 1724471 | 35795.2 |
| hypothetical protein | DWV56_08545 | Not Available | Negative | 1724692 - 1725597 | 35413.1 |
| had family phosphatase | DWV56_08555 | Not Available | Negative | 1726653 - 1727243 | 22470.9 |
| duf1667 domain-containing protein | DWV56_08560 | Not Available | Negative | 1727396 - 1727740 | 12535.3 |
| fad-dependent oxidoreductase | DWV56_08565 | Not Available | Negative | 1727740 - 1729044 | 47882.1 |
| fad/nad(p)-binding oxidoreductase | DWV56_08570 | Not Available | Negative | 1728995 - 1730425 | 52683.3 |
| dna-directed rna polymerase subunit alpha | DWV56_08575 | Not Available | Positive | 1730551 - 1731507 | 35442.5 |
| 50s ribosomal protein l17 | DWV56_08580 | Not Available | Positive | 1731519 - 1731881 | 13470.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
