Kingdom
Bacillati
Phylum
Bacillota
Class
Erysipelotrichia
Order
Erysipelotrichales
Family
Erysipelotrichaceae
Genus
Holdemanella
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Erysipelotrichia |
| Order | Erysipelotrichales |
| Family | Erysipelotrichaceae |
| Genus | Holdemanella |
| Species | Holdemanella biformis |
| Strain | strain AF10-31 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | feces |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
820351 bp
Thymine Count
835766 bp
Guanine Count
430183 bp
Cytosine Count
431129 bp
Genome Length
2518124 bp
Protein-coding Genes
2385 genes
Non-Coding Genes
60 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| deoxyribonuclease iv | DWV56_08120 | Not Available | Negative | 1636636 - 1637475 | 31160.5 |
| atp-dependent helicase | DWV56_08125 | Not Available | Negative | 1637472 - 1638794 | 51411.8 |
| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase | DWV56_08130 | Not Available | Positive | 1638876 - 1639775 | 33975.9 |
| sam-dependent methyltransferase | DWV56_08135 | Not Available | Negative | 1639760 - 1640413 | 24927.9 |
| rna polymerase sigma factor rpod | DWV56_08140 | Not Available | Negative | 1640413 - 1641642 | 47027.6 |
| dna primase | DWV56_08145 | Not Available | Negative | 1641647 - 1643413 | 68402.6 |
| glycine--trna ligase | DWV56_08150 | Not Available | Negative | 1643413 - 1644792 | 52755.3 |
| dna repair protein reco | DWV56_08160 | Not Available | Negative | 1645383 - 1646105 | 28357.2 |
| gtpase era | DWV56_08165 | Not Available | Negative | 1646095 - 1647054 | 36900.1 |
| diacylglycerol kinase family protein | DWV56_08170 | Not Available | Negative | 1647015 - 1647362 | 13313.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
