Kingdom
Bacillati
Phylum
Bacillota
Class
Erysipelotrichia
Order
Erysipelotrichales
Family
Erysipelotrichaceae
Genus
Holdemanella
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Erysipelotrichia |
| Order | Erysipelotrichales |
| Family | Erysipelotrichaceae |
| Genus | Holdemanella |
| Species | Holdemanella biformis |
| Strain | strain AF10-31 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | feces |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
820351 bp
Thymine Count
835766 bp
Guanine Count
430183 bp
Cytosine Count
431129 bp
Genome Length
2518124 bp
Protein-coding Genes
2385 genes
Non-Coding Genes
60 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DWV56_08070 | Not Available | Negative | 1629023 - 1629391 | 14267.3 |
| prepilin-type n-terminal cleavage/methylation domain-containing protein | DWV56_08075 | Not Available | Negative | 1629372 - 1629764 | 15681.2 |
| type ii secretion system protein | DWV56_08080 | Not Available | Negative | 1629875 - 1630267 | 14867.2 |
| prepilin-type n-terminal cleavage/methylation domain-containing protein | DWV56_08085 | Not Available | Negative | 1630245 - 1630544 | 11219.0 |
| hypothetical protein | DWV56_08090 | Not Available | Negative | 1630558 - 1631646 | 42565.4 |
| competence protein comg | DWV56_08095 | Not Available | Negative | 1631468 - 1632457 | 38021.9 |
| mbl fold metallo-hydrolase | DWV56_08100 | Not Available | Negative | 1632502 - 1633125 | 23024.4 |
| 50s ribosomal protein l33 | DWV56_08105 | Not Available | Negative | 1633165 - 1633314 | 5931.23 |
| penicillin-binding protein 2 | DWV56_08110 | Not Available | Negative | 1633394 - 1635448 | 75963.9 |
| flavodoxin-dependent (e)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase | DWV56_08115 | Not Available | Positive | 1635573 - 1636622 | 38591.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
