Kingdom
Bacillati
Phylum
Bacillota
Class
Erysipelotrichia
Order
Erysipelotrichales
Family
Erysipelotrichaceae
Genus
Holdemanella
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Erysipelotrichia |
| Order | Erysipelotrichales |
| Family | Erysipelotrichaceae |
| Genus | Holdemanella |
| Species | Holdemanella biformis |
| Strain | strain AF10-31 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | feces |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
820351 bp
Thymine Count
835766 bp
Guanine Count
430183 bp
Cytosine Count
431129 bp
Genome Length
2518124 bp
Protein-coding Genes
2385 genes
Non-Coding Genes
60 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DWV56_08020 | Not Available | Negative | 1618450 - 1618776 | 12035.8 |
| had-iib family hydrolase | DWV56_08025 | Not Available | Negative | 1618769 - 1619542 | 29633.0 |
| hypothetical protein | DWV56_08030 | Not Available | Negative | 1619542 - 1620084 | 21083.8 |
| paai family thioesterase | DWV56_08035 | Not Available | Positive | 1620163 - 1620591 | 15711.9 |
| ribosome-associated translation inhibitor raia | DWV56_08040 | Not Available | Negative | 1620711 - 1621244 | 20384.4 |
| 3-deoxy-7-phosphoheptulonate synthase | DWV56_08045 | Not Available | Positive | 1621593 - 1622606 | 37102.5 |
| tigr01212 family radical sam protein | DWV56_08050 | Not Available | Positive | 1622657 - 1623586 | 35589.6 |
| tyrosine--trna ligase | DWV56_08055 | Not Available | Negative | 1623603 - 1624835 | 46508.6 |
| peptidoglycan bridge formation glycyltransferase fema/femb family protein | DWV56_08060 | Not Available | Negative | 1625089 - 1626342 | 49138.3 |
| leucine--trna ligase | DWV56_08065 | Not Available | Negative | 1626354 - 1628768 | 91963.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
