Kingdom
Bacillati
Phylum
Bacillota
Class
Erysipelotrichia
Order
Erysipelotrichales
Family
Erysipelotrichaceae
Genus
Holdemanella
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Erysipelotrichia |
| Order | Erysipelotrichales |
| Family | Erysipelotrichaceae |
| Genus | Holdemanella |
| Species | Holdemanella biformis |
| Strain | strain AF10-31 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | feces |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
820351 bp
Thymine Count
835766 bp
Guanine Count
430183 bp
Cytosine Count
431129 bp
Genome Length
2518124 bp
Protein-coding Genes
2385 genes
Non-Coding Genes
60 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pts mannose/fructose/sorbose transporter subunit iib | DWV56_07970 | Not Available | Negative | 1598290 - 1598781 | 18393.0 |
| pts sugar transporter subunit iia | DWV56_07975 | Not Available | Negative | 1598837 - 1599265 | 15377.3 |
| sialidase | DWV56_07980 | Not Available | Negative | 1599617 - 1605058 | 200945.0 |
| hypothetical protein | DWV56_07985 | Not Available | Negative | 1605244 - 1606011 | 29695.3 |
| hypothetical protein | DWV56_07990 | Not Available | Negative | 1606055 - 1606498 | 17062.5 |
| duf5110 domain-containing protein | DWV56_07995 | Not Available | Negative | 1606556 - 1613485 | 254869.0 |
| sugar abc transporter substrate-binding protein | DWV56_08000 | Not Available | Negative | 1614165 - 1615466 | 49708.8 |
| dna-binding response regulator | DWV56_08005 | Not Available | Negative | 1615469 - 1616122 | 24295.0 |
| sensor histidine kinase | DWV56_08010 | Not Available | Negative | 1616115 - 1617425 | 50426.1 |
| sugar abc transporter substrate-binding protein | DWV56_08015 | Not Available | Negative | 1617422 - 1618402 | 36702.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
