Kingdom
Bacillati
Phylum
Bacillota
Class
Erysipelotrichia
Order
Erysipelotrichales
Family
Erysipelotrichaceae
Genus
Holdemanella
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Erysipelotrichia |
| Order | Erysipelotrichales |
| Family | Erysipelotrichaceae |
| Genus | Holdemanella |
| Species | Holdemanella biformis |
| Strain | strain AF10-31 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | feces |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
820351 bp
Thymine Count
835766 bp
Guanine Count
430183 bp
Cytosine Count
431129 bp
Genome Length
2518124 bp
Protein-coding Genes
2385 genes
Non-Coding Genes
60 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphoglycerate kinase | DWV56_07865 | Not Available | Negative | 1572703 - 1573887 | 42014.6 |
| 23s rrna (pseudouridine(1915)-n(3))-methyltransferase rlmh | DWV56_07870 | Not Available | Negative | 1573996 - 1574469 | 18265.3 |
| abc transporter atp-binding protein | DWV56_07875 | Not Available | Negative | 1574516 - 1575214 | 27083.9 |
| abc transporter permease | DWV56_07880 | Not Available | Negative | 1575321 - 1577288 | 75371.7 |
| abc transporter atp-binding protein | DWV56_07885 | Not Available | Negative | 1577281 - 1578048 | 28411.3 |
| sensor histidine kinase | DWV56_07890 | Not Available | Negative | 1578140 - 1579129 | 38499.1 |
| dna-binding response regulator | DWV56_07895 | Not Available | Negative | 1579126 - 1579794 | 25791.4 |
| hypothetical protein | DWV56_07900 | Not Available | Positive | 1580145 - 1580648 | 19703.9 |
| crispr-associated endonuclease cas2 | DWV56_07905 | Not Available | Negative | 1581855 - 1582118 | 10334.5 |
| crispr-associated endonuclease cas1 | DWV56_07910 | Not Available | Negative | 1582123 - 1582775 | 25714.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
