Kingdom
Bacillati
Phylum
Bacillota
Class
Erysipelotrichia
Order
Erysipelotrichales
Family
Erysipelotrichaceae
Genus
Holdemanella
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Erysipelotrichia |
| Order | Erysipelotrichales |
| Family | Erysipelotrichaceae |
| Genus | Holdemanella |
| Species | Holdemanella biformis |
| Strain | strain AF10-31 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | feces |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
820351 bp
Thymine Count
835766 bp
Guanine Count
430183 bp
Cytosine Count
431129 bp
Genome Length
2518124 bp
Protein-coding Genes
2385 genes
Non-Coding Genes
60 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sensor histidine kinase | DWV56_07710 | Not Available | Positive | 1542307 - 1543563 | 48085.3 |
| hypothetical protein | DWV56_07715 | Not Available | Negative | 1543600 - 1543823 | 8082.89 |
| fad-dependent oxidoreductase | DWV56_07720 | Not Available | Negative | 1543832 - 1545754 | 69933.4 |
| duf4300 family protein | DWV56_07725 | Not Available | Negative | 1545952 - 1546779 | 31816.9 |
| methyltransferase domain-containing protein | DWV56_07735 | Not Available | Negative | 1548467 - 1549228 | 29501.4 |
| trna 4-thiouridine(8) synthase thii | DWV56_07740 | Not Available | Negative | 1549280 - 1550470 | 44880.4 |
| cysteine desulfurase | DWV56_07745 | Not Available | Negative | 1550454 - 1551584 | 41772.1 |
| negative regulator of septation ring formation | DWV56_07750 | Not Available | Negative | 1551584 - 1553359 | 68397.6 |
| 30s ribosomal protein s4 | DWV56_07755 | Not Available | Positive | 1553623 - 1554231 | 23304.0 |
| single-stranded dna-binding protein | DWV56_07760 | Not Available | Negative | 1554320 - 1554628 | 11622.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
