Kingdom
Bacillati
Phylum
Bacillota
Class
Erysipelotrichia
Order
Erysipelotrichales
Family
Erysipelotrichaceae
Genus
Holdemanella
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Erysipelotrichia |
| Order | Erysipelotrichales |
| Family | Erysipelotrichaceae |
| Genus | Holdemanella |
| Species | Holdemanella biformis |
| Strain | strain AF10-31 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | feces |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
820351 bp
Thymine Count
835766 bp
Guanine Count
430183 bp
Cytosine Count
431129 bp
Genome Length
2518124 bp
Protein-coding Genes
2385 genes
Non-Coding Genes
60 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type iii-a crispr-associated ramp protein csm5 | DWV56_07250 | Not Available | Positive | 1459830 - 1460969 | 44532.5 |
| hypothetical protein | DWV56_07255 | Not Available | Positive | 1460920 - 1461681 | 29535.7 |
| crispr-associated endoribonuclease cas6 | DWV56_07260 | Not Available | Positive | 1461659 - 1462399 | 29117.1 |
| amino acid abc transporter substrate-binding protein | DWV56_07270 | Not Available | Positive | 1463356 - 1464117 | 27759.1 |
| amino acid abc transporter permease | DWV56_07275 | Not Available | Positive | 1464138 - 1464821 | 24606.1 |
| amino acid abc transporter atp-binding protein | DWV56_07280 | Not Available | Positive | 1464814 - 1465545 | 27561.2 |
| duf1307 domain-containing protein | DWV56_07290 | Not Available | Positive | 1466663 - 1467175 | 19147.0 |
| phosphoesterase | DWV56_07295 | Not Available | Positive | 1467207 - 1467839 | 25358.9 |
| gntr family transcriptional regulator | DWV56_07300 | Not Available | Positive | 1467870 - 1468592 | 27989.7 |
| rok family protein | DWV56_07305 | Not Available | Positive | 1468589 - 1469428 | 30811.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
