Kingdom
Bacillati
Phylum
Bacillota
Class
Erysipelotrichia
Order
Erysipelotrichales
Family
Erysipelotrichaceae
Genus
Holdemanella
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Erysipelotrichia |
| Order | Erysipelotrichales |
| Family | Erysipelotrichaceae |
| Genus | Holdemanella |
| Species | Holdemanella biformis |
| Strain | strain AF10-31 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | feces |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
820351 bp
Thymine Count
835766 bp
Guanine Count
430183 bp
Cytosine Count
431129 bp
Genome Length
2518124 bp
Protein-coding Genes
2385 genes
Non-Coding Genes
60 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DWV56_07050 | Not Available | Positive | 1426410 - 1427186 | 29737.1 |
| hit family protein | DWV56_07055 | Not Available | Negative | 1427204 - 1427596 | 14859.6 |
| udp-n-acetylmuramoyl-tripeptide--d-alanyl-d- alanine ligase | DWV56_07060 | Not Available | Positive | 1427981 - 1429339 | 50292.4 |
| d-alanine--d-alanine ligase | DWV56_07065 | Not Available | Positive | 1429332 - 1430387 | 39263.2 |
| alanine racemase | DWV56_07070 | Not Available | Positive | 1430381 - 1431532 | 43388.2 |
| acyltransferase | DWV56_07075 | Not Available | Positive | 1431529 - 1432542 | 39963.9 |
| hypothetical protein | DWV56_07080 | Not Available | Positive | 1432547 - 1434118 | 58665.3 |
| yqeg family had iiia-type phosphatase | DWV56_07085 | Not Available | Positive | 1434118 - 1434642 | 19957.4 |
| ribosome biogenesis gtpase yqeh | DWV56_07090 | Not Available | Positive | 1434635 - 1435714 | 40415.2 |
| ribosome assembly rna-binding protein yhby | DWV56_07095 | Not Available | Positive | 1435714 - 1436004 | 10757.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
