Kingdom
Bacillati
Phylum
Bacillota
Class
Erysipelotrichia
Order
Erysipelotrichales
Family
Erysipelotrichaceae
Genus
Holdemanella
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Erysipelotrichia |
| Order | Erysipelotrichales |
| Family | Erysipelotrichaceae |
| Genus | Holdemanella |
| Species | Holdemanella biformis |
| Strain | strain AF10-31 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | feces |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
820351 bp
Thymine Count
835766 bp
Guanine Count
430183 bp
Cytosine Count
431129 bp
Genome Length
2518124 bp
Protein-coding Genes
2385 genes
Non-Coding Genes
60 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pts sugar transporter subunit iib | DWV56_06950 | Not Available | Positive | 1407170 - 1407463 | 10269.7 |
| pts lactose/cellobiose transporter subunit iia | DWV56_06955 | Not Available | Positive | 1407465 - 1407785 | 12100.5 |
| hypothetical protein | DWV56_06960 | Not Available | Positive | 1407787 - 1408383 | 22862.1 |
| hypothetical protein | DWV56_06965 | Not Available | Positive | 1408406 - 1409008 | 22929.5 |
| purine-nucleoside phosphorylase | DWV56_06970 | Not Available | Positive | 1409054 - 1409770 | 26255.3 |
| phosphopentomutase | DWV56_06975 | Not Available | Positive | 1409767 - 1410951 | 43534.8 |
| mate family efflux transporter | DWV56_06980 | Not Available | Positive | 1411038 - 1412357 | 48590.7 |
| rna methyltransferase | DWV56_06985 | Not Available | Negative | 1412364 - 1413098 | 27838.9 |
| phenylalanine--trna ligase subunit alpha | DWV56_06990 | Not Available | Positive | 1413403 - 1414437 | 39180.2 |
| phenylalanine--trna ligase subunit beta | DWV56_06995 | Not Available | Positive | 1414450 - 1416837 | 87612.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
