Kingdom
Bacillati
Phylum
Bacillota
Class
Erysipelotrichia
Order
Erysipelotrichales
Family
Erysipelotrichaceae
Genus
Holdemanella
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Erysipelotrichia |
| Order | Erysipelotrichales |
| Family | Erysipelotrichaceae |
| Genus | Holdemanella |
| Species | Holdemanella biformis |
| Strain | strain AF10-31 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | feces |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
820351 bp
Thymine Count
835766 bp
Guanine Count
430183 bp
Cytosine Count
431129 bp
Genome Length
2518124 bp
Protein-coding Genes
2385 genes
Non-Coding Genes
60 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pts fructose transporter subunit iib | DWV56_06385 | Not Available | Negative | 1301101 - 1301418 | 11330.9 |
| pts sugar transporter subunit iia | DWV56_06390 | Not Available | Negative | 1301418 - 1301906 | 18630.2 |
| transcription antiterminator | DWV56_06395 | Not Available | Negative | 1301924 - 1303819 | 72614.7 |
| hypothetical protein | DWV56_06400 | Not Available | Negative | 1303816 - 1304121 | 11617.4 |
| decarboxylating 6-phosphogluconate dehydrogenase | DWV56_06405 | Not Available | Negative | 1304132 - 1305028 | 32489.1 |
| murr/rpir family transcriptional regulator | DWV56_06410 | Not Available | Positive | 1305305 - 1306159 | 31965.7 |
| class ii fructose-bisphosphate aldolase | DWV56_06415 | Not Available | Positive | 1306279 - 1307118 | 30873.1 |
| dna-binding protein | DWV56_06420 | Not Available | Positive | 1307081 - 1307599 | 19358.7 |
| four-carbon acid sugar kinase family protein | DWV56_06425 | Not Available | Positive | 1307596 - 1308777 | 44252.8 |
| class ii aldolase/adducin family protein | DWV56_06430 | Not Available | Positive | 1308781 - 1309365 | 22151.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
