Kingdom
Bacillati
Phylum
Bacillota
Class
Erysipelotrichia
Order
Erysipelotrichales
Family
Erysipelotrichaceae
Genus
Holdemanella
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Erysipelotrichia |
| Order | Erysipelotrichales |
| Family | Erysipelotrichaceae |
| Genus | Holdemanella |
| Species | Holdemanella biformis |
| Strain | strain AF10-31 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | feces |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
820351 bp
Thymine Count
835766 bp
Guanine Count
430183 bp
Cytosine Count
431129 bp
Genome Length
2518124 bp
Protein-coding Genes
2385 genes
Non-Coding Genes
60 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| xaa-pro aminopeptidase | DWV56_06230 | Not Available | Negative | 1268407 - 1269795 | 52000.4 |
| is110 family transposase | DWV56_06235 | Not Available | Negative | 1270296 - 1271660 | 51967.5 |
| pyruvate formate lyase-activating protein | DWV56_06240 | Not Available | Negative | 1272112 - 1272837 | 27737.7 |
| formate c-acetyltransferase | DWV56_06245 | Not Available | Negative | 1272866 - 1275103 | 84439.0 |
| yitt family protein | DWV56_06250 | Not Available | Negative | 1275337 - 1276206 | 31745.6 |
| duf4825 domain-containing protein | DWV56_06255 | Not Available | Positive | 1276341 - 1277558 | 46918.0 |
| efflux rnd transporter periplasmic adaptor subunit | DWV56_06265 | Not Available | Positive | 1279354 - 1280517 | 42831.9 |
| abc transporter atp-binding protein | DWV56_06270 | Not Available | Positive | 1280507 - 1281193 | 24847.0 |
| biotin/lipoyl-binding protein | DWV56_06275 | Not Available | Positive | 1281190 - 1282944 | 64946.8 |
| abc transporter permease | DWV56_06280 | Not Available | Positive | 1282941 - 1284185 | 45070.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
