Kingdom
Bacillati
Phylum
Bacillota
Class
Erysipelotrichia
Order
Erysipelotrichales
Family
Erysipelotrichaceae
Genus
Holdemanella
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Erysipelotrichia |
| Order | Erysipelotrichales |
| Family | Erysipelotrichaceae |
| Genus | Holdemanella |
| Species | Holdemanella biformis |
| Strain | strain AF10-31 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | feces |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
820351 bp
Thymine Count
835766 bp
Guanine Count
430183 bp
Cytosine Count
431129 bp
Genome Length
2518124 bp
Protein-coding Genes
2385 genes
Non-Coding Genes
60 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mate family efflux transporter | DWV56_00555 | Not Available | Negative | 107463 - 108845 | 50730.9 |
| class ib ribonucleoside-diphosphate reductase assembly flavoprotein nrdi | DWV56_00560 | Not Available | Positive | 108943 - 109293 | 12543.5 |
| duf3793 family protein | DWV56_00565 | Not Available | Positive | 109296 - 109829 | 21224.4 |
| m20/m25/m40 family metallo-hydrolase | DWV56_00570 | Not Available | Negative | 109978 - 111009 | 38391.4 |
| peroxide stress protein yaaa | DWV56_00575 | Not Available | Positive | 111053 - 111763 | 27649.5 |
| gfo/idh/moca family oxidoreductase | DWV56_00580 | Not Available | Negative | 111758 - 112738 | 37278.6 |
| sensor histidine kinase | DWV56_00585 | Not Available | Negative | 112735 - 114150 | 54476.9 |
| dna-binding response regulator | DWV56_00590 | Not Available | Negative | 114212 - 114871 | 25915.8 |
| phosphoglucosamine mutase | DWV56_00595 | Not Available | Negative | 114887 - 116221 | 49250.0 |
| 16s ribosomal rna | Not Available | Not Available | Positive | 116880 - 118428 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
