Kingdom
Bacillati
Phylum
Bacillota
Class
Erysipelotrichia
Order
Erysipelotrichales
Family
Erysipelotrichaceae
Genus
Holdemanella
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Erysipelotrichia |
| Order | Erysipelotrichales |
| Family | Erysipelotrichaceae |
| Genus | Holdemanella |
| Species | Holdemanella biformis |
| Strain | strain AF10-31 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | feces |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
820351 bp
Thymine Count
835766 bp
Guanine Count
430183 bp
Cytosine Count
431129 bp
Genome Length
2518124 bp
Protein-coding Genes
2385 genes
Non-Coding Genes
60 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| site-specific integrase | DWV56_05855 | Not Available | Negative | 1180571 - 1182070 | 59294.4 |
| hypothetical protein | DWV56_05860 | Not Available | Negative | 1182060 - 1183790 | 69125.6 |
| recombinase | DWV56_05865 | Not Available | Negative | 1183819 - 1184943 | 44464.6 |
| atp-dependent dna helicase | DWV56_05870 | Not Available | Negative | 1185099 - 1187066 | 76170.7 |
| sigma-70 family rna polymerase sigma factor | DWV56_05875 | Not Available | Negative | 1187601 - 1188035 | 17705.2 |
| hypothetical protein | DWV56_05880 | Not Available | Negative | 1188363 - 1188989 | 23301.2 |
| atp-binding protein | DWV56_05895 | Not Available | Negative | 1199482 - 1200756 | 49479.0 |
| dna-binding response regulator | DWV56_05900 | Not Available | Negative | 1200753 - 1201466 | 28676.8 |
| hypothetical protein | DWV56_05905 | Not Available | Negative | 1201870 - 1202430 | 22251.2 |
| duf1906 domain-containing protein | DWV56_05910 | Not Available | Negative | 1202511 - 1204772 | 81652.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
