Kingdom
Bacillati
Phylum
Bacillota
Class
Erysipelotrichia
Order
Erysipelotrichales
Family
Erysipelotrichaceae
Genus
Holdemanella
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Erysipelotrichia |
| Order | Erysipelotrichales |
| Family | Erysipelotrichaceae |
| Genus | Holdemanella |
| Species | Holdemanella biformis |
| Strain | strain AF10-31 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | feces |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
820351 bp
Thymine Count
835766 bp
Guanine Count
430183 bp
Cytosine Count
431129 bp
Genome Length
2518124 bp
Protein-coding Genes
2385 genes
Non-Coding Genes
60 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cof-type had-iib family hydrolase | DWV56_05315 | Not Available | Negative | 1082912 - 1083745 | 30811.9 |
| hypothetical protein | DWV56_05320 | Not Available | Positive | 1083824 - 1084522 | 26861.1 |
| aminopeptidase p family protein | DWV56_05325 | Not Available | Positive | 1084541 - 1086319 | 67046.9 |
| hypothetical protein | DWV56_05330 | Not Available | Positive | 1086319 - 1086801 | 19068.4 |
| udp-glucose 4-epimerase gale | DWV56_05335 | Not Available | Positive | 1086833 - 1087834 | 36852.4 |
| tryptophan--trna ligase | DWV56_05340 | Not Available | Positive | 1087847 - 1088905 | 39831.0 |
| cupin domain-containing protein | DWV56_05345 | Not Available | Positive | 1088917 - 1089261 | 12828.2 |
| ld-carboxypeptidase | DWV56_05350 | Not Available | Positive | 1089656 - 1090705 | 39290.5 |
| hicb family protein | DWV56_05355 | Not Available | Negative | 1090915 - 1091337 | 15967.1 |
| type ii toxin-antitoxin system hica family toxin | DWV56_05360 | Not Available | Negative | 1091373 - 1091561 | 7035.67 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
