Kingdom
Bacillati
Phylum
Bacillota
Class
Erysipelotrichia
Order
Erysipelotrichales
Family
Erysipelotrichaceae
Genus
Holdemanella
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Erysipelotrichia |
| Order | Erysipelotrichales |
| Family | Erysipelotrichaceae |
| Genus | Holdemanella |
| Species | Holdemanella biformis |
| Strain | strain AF10-31 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | feces |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
820351 bp
Thymine Count
835766 bp
Guanine Count
430183 bp
Cytosine Count
431129 bp
Genome Length
2518124 bp
Protein-coding Genes
2385 genes
Non-Coding Genes
60 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| class ii fumarate hydratase | DWV56_05165 | Not Available | Negative | 1047962 - 1049335 | 50838.0 |
| type i pullulanase | DWV56_05170 | Not Available | Positive | 1049441 - 1051543 | 80650.6 |
| imp dehydrogenase | DWV56_05175 | Not Available | Positive | 1051589 - 1053100 | 55241.5 |
| anaerobic ribonucleoside-triphosphate reductase activating protein | DWV56_05180 | Not Available | Positive | 1053072 - 1054298 | 47571.8 |
| anaerobic ribonucleoside-triphosphate reductase | DWV56_05185 | Not Available | Positive | 1054295 - 1056253 | 74439.8 |
| pyrroline-5-carboxylate reductase | DWV56_05190 | Not Available | Positive | 1056204 - 1057070 | 31557.3 |
| leucyl aminopeptidase family protein | DWV56_05195 | Not Available | Positive | 1057073 - 1058362 | 46925.8 |
| branched-chain amino acid aminotransferase | DWV56_05200 | Not Available | Positive | 1058431 - 1059492 | 39560.1 |
| duf1836 domain-containing protein | DWV56_05205 | Not Available | Negative | 1059952 - 1060440 | 19574.5 |
| degv family protein | DWV56_05210 | Not Available | Positive | 1060547 - 1061392 | 30738.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
