Kingdom
Bacillati
Phylum
Bacillota
Class
Erysipelotrichia
Order
Erysipelotrichales
Family
Erysipelotrichaceae
Genus
Holdemanella
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Erysipelotrichia |
| Order | Erysipelotrichales |
| Family | Erysipelotrichaceae |
| Genus | Holdemanella |
| Species | Holdemanella biformis |
| Strain | strain AF10-31 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | feces |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
820351 bp
Thymine Count
835766 bp
Guanine Count
430183 bp
Cytosine Count
431129 bp
Genome Length
2518124 bp
Protein-coding Genes
2385 genes
Non-Coding Genes
60 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 1-deoxy-d-xylulose-5-phosphate reductoisomerase | DWV56_05115 | Not Available | Positive | 1035104 - 1036240 | 42323.0 |
| hypothetical protein | DWV56_05120 | Not Available | Positive | 1036292 - 1037779 | 55163.2 |
| php domain-containing protein | DWV56_05125 | Not Available | Positive | 1037713 - 1039353 | 62901.8 |
| methionine--trna ligase | DWV56_05130 | Not Available | Positive | 1039631 - 1041556 | 73369.7 |
| hypothetical protein | DWV56_05135 | Not Available | Positive | 1041556 - 1041738 | 6805.71 |
| ggdef domain-containing protein | DWV56_05140 | Not Available | Negative | 1041796 - 1042956 | 44697.2 |
| is91 family transposase | DWV56_05145 | Not Available | Negative | 1043603 - 1044700 | 42865.1 |
| hypothetical protein | DWV56_05150 | Not Available | Negative | 1044700 - 1045557 | 33325.5 |
| hypothetical protein | DWV56_05155 | Not Available | Positive | 1045677 - 1045955 | 10762.2 |
| cardiolipin synthase | DWV56_05160 | Not Available | Positive | 1046493 - 1047941 | 55815.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
