Segatella copri strain AF11-14

Gram-negativeAnaerobe

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Bacteroidia

Order

Bacteroidales

Family

Prevotellaceae

Genus

Segatella

Description

Segatella copri strain AF11-14 is a Gram-negative anaerobic bacterium that predominantly inhabits the gut environment. Its classification as an anaerobe indicates that it thrives in oxygen-depleted conditions, which are typical of the intestinal microbiota. This strain contributes to the complex microbial community within the gastrointestinal tract, where it may play a role in various metabolic processes. As a member of the gut microbiome, Segatella copri strain AF11-14 could be involved in the fermentation of dietary fibers, producing short-chain fatty acids that are crucial for gut health and host metabolism. The presence of anaerobic bacteria like this strain is essential for maintaining a balanced gut ecosystem, as they can compete with pathogenic microorganisms and contribute to the overall homeostasis of the intestinal environment. Further investigations into the specific metabolic capabilities and interactions of Segatella copri strain AF11-14 within the gut microbiome could yield insights into its potential benefits for host health, particularly in relation to digestive efficiency and immune function. Understanding this strain's ecological role may provide valuable information on how gut microbial communities can be influenced by dietary and environmental factors.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassBacteroidia
OrderBacteroidales
FamilyPrevotellaceae
GenusSegatella
SpeciesSegatella copri
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobe
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatgut
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Segatella copri strain AF11-14

Accession NumberQSAQ00000000.1

Gene Summary

Adenine Count

1059450 bp

Thymine Count

1053797 bp

Guanine Count

862983 bp

Cytosine Count

859379 bp

Genome Length

3836054 bp

Protein-coding Genes

3143 genes

Non-Coding Genes

79 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
hepatitis a virus cellular receptor 1DWV60_00005Not Available+565 - 114922717.8
hypothetical proteinDWV60_00010Not Available+1188 - 190426923.8
dna/rna non-specific endonucleaseDWV60_00015Not Available-1997 - 304038784.2
type b 50s ribosomal protein l31DWV60_00020Not Available-3222 - 34739513.39
5s ribosomal rnaNot AvailableNot Available+4409 - 4521Not Available
hypothetical proteinDWV60_00025Not Available-3795 - 518649090.3
hypothetical proteinDWV60_00030Not Available-5267 - 643041532.3
tonb-dependent receptorDWV60_00035Not Available-6524 - 912498224.2
endonuclease/exonuclease/phosphatase family proteinDWV60_00040Not Available+9456 - 1052640190.5
uracil-dna glycosylase family proteinDWV60_00045Not Available+10660 - 1122922411.2

Displaying genes 1 – 10 of 3222 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites