Bifidobacterium pseudocatenulatum strain AF11-18

Gram-positiveRodAnaerobe

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Bifidobacteriales

Family

Bifidobacteriaceae

Genus

Bifidobacterium

Description

Bifidobacterium pseudocatenulatum strain AF11-18 is a Gram-positive, anaerobic, rod-shaped bacterium primarily found in the gastrointestinal tracts of adults and breastfed infants. It is part of the diverse gut microbiomes, contributing to the overall microbial composition in both adult and infant gut environments, including those of Vietnamese populations. This strain is characterized by the presence of flagella, which may aid in its motility within the gut environment. It has a single replicon, indicating a streamlined genomic organization, which can be beneficial for its adaptation to the anaerobic conditions typical of the gut. Bifidobacterium pseudocatenulatum has been associated with health effects, particularly in relation to pyogenic infections. This suggests a potential role in influencing host health and disease dynamics, although the specifics of this relationship warrant further investigation. Understanding the ecological role of Bifidobacterium pseudocatenulatum strain AF11-18 in the gut microbiota is crucial, as it may contribute to maintaining gut health and combating pathogenic organisms. Its presence in both adults and infants highlights its adaptability and importance in the microbial ecosystem, potentially offering insights into the development of gut health from infancy through adulthood.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderBifidobacteriales
FamilyBifidobacteriaceae
GenusBifidobacterium
SpeciesBifidobacterium pseudocatenulatum
Strainstrain AF11-18

Profile

Physiology
Gram staining propertiesPositive
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Bifidobacterium pseudocatenulatum strain AF11-18
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobe
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatgastrointestinal tracts of adults and breastfed infants; gut; gut microbiomes; infant gut; infant gut microbiota; Vietnamese gut microbiota
Biotic relationshipNot Available
Host(s)Homo sapiens
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Bifidobacterium pseudocatenulatum strain AF11-18 AF11-18.Scaf9,

Gene Summary

Adenine Count

496054 bp

Thymine Count

497345 bp

Guanine Count

634289 bp

Cytosine Count

640245 bp

Genome Length

2267953 bp

Protein-coding Genes

1748 genes

Non-Coding Genes

63 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinDWV61_03700Not AvailableNegative887785 - 8880338888.92
type ii toxin-antitoxin system relb/dinj family antitoxinDWV61_03705Not AvailablePositive888355 - 8885798448.05
Trna-leuNot AvailableNot AvailablePositive888689 - 888765Not Available
pyruvate kinaseDWV61_03715Not AvailableNegative888983 - 89042551878.6
terc family proteinDWV61_03720Not AvailableNegative890598 - 89158136157.4
excinuclease abc subunit uvrbDWV61_03725Not AvailableNegative891621 - 89373279653.8
dephospho-coa kinaseDWV61_03730Not AvailableNegative893735 - 89440324792.9
30s ribosomal protein s1DWV61_03735Not AvailableNegative894489 - 89596454699.1
bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolaseDWV61_03740Not AvailableNegative896132 - 89700731071.9
abc transporter substrate-binding proteinDWV61_03745Not AvailablePositive897148 - 89823639230.8

Displaying genes 711 – 720 of 1811 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
Pyogenic infectionsCausesPMC8557894

Displaying health effects 1 – 1 of 1 in total