Bifidobacterium pseudocatenulatum strain AF11-18

Gram-positiveRodAnaerobe

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Bifidobacteriales

Family

Bifidobacteriaceae

Genus

Bifidobacterium

Description

Bifidobacterium pseudocatenulatum strain AF11-18 is a Gram-positive, anaerobic, rod-shaped bacterium primarily found in the gastrointestinal tracts of adults and breastfed infants. It is part of the diverse gut microbiomes, contributing to the overall microbial composition in both adult and infant gut environments, including those of Vietnamese populations. This strain is characterized by the presence of flagella, which may aid in its motility within the gut environment. It has a single replicon, indicating a streamlined genomic organization, which can be beneficial for its adaptation to the anaerobic conditions typical of the gut. Bifidobacterium pseudocatenulatum has been associated with health effects, particularly in relation to pyogenic infections. This suggests a potential role in influencing host health and disease dynamics, although the specifics of this relationship warrant further investigation. Understanding the ecological role of Bifidobacterium pseudocatenulatum strain AF11-18 in the gut microbiota is crucial, as it may contribute to maintaining gut health and combating pathogenic organisms. Its presence in both adults and infants highlights its adaptability and importance in the microbial ecosystem, potentially offering insights into the development of gut health from infancy through adulthood.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderBifidobacteriales
FamilyBifidobacteriaceae
GenusBifidobacterium
SpeciesBifidobacterium pseudocatenulatum
Strainstrain AF11-18

Profile

Physiology
Gram staining propertiesPositive
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Bifidobacterium pseudocatenulatum strain AF11-18
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobe
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatgastrointestinal tracts of adults and breastfed infants; gut; gut microbiomes; infant gut; infant gut microbiota; Vietnamese gut microbiota
Biotic relationshipNot Available
Host(s)Homo sapiens
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Bifidobacterium pseudocatenulatum strain AF11-18 AF11-18.Scaf9,

Gene Summary

Adenine Count

496054 bp

Thymine Count

497345 bp

Guanine Count

634289 bp

Cytosine Count

640245 bp

Genome Length

2267953 bp

Protein-coding Genes

1748 genes

Non-Coding Genes

63 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
phospho-n-acetylmuramoyl-pentapeptide- transferaseDWV61_01260Not AvailablePositive329804 - 33090139891.6
udp-n-acetylmuramoyl-l-alanine--d-glutamate ligaseDWV61_01265Not AvailablePositive330995 - 33242850587.7
cell division protein ftswDWV61_01270Not AvailablePositive332562 - 33365038430.6
udp-n-acetylglucosamine--n-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol n-acetylglucosamine transferaseDWV61_01275Not AvailablePositive333781 - 33495641624.1
udp-n-acetylmuramate--l-alanine ligaseDWV61_01280Not AvailablePositive335077 - 33664255761.5
cell division protein ftsqDWV61_01285Not AvailablePositive336726 - 33773335594.6
age family epimerase/isomeraseDWV61_01290Not AvailableNegative337828 - 33908446568.7
Tmrna,resume consensus sequence (at 89): aataagtgctaaatctaaNot AvailableNot AvailablePositive339475 - 339869Not Available
metal-independent alpha-mannosidaseDWV61_01300Not AvailableNegative339998 - 34132349474.4
carbohydrate kinaseDWV61_01305Not AvailableNegative341459 - 34235832304.2

Displaying genes 241 – 250 of 1811 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
Pyogenic infectionsCausesPMC8557894

Displaying health effects 1 – 1 of 1 in total