Bifidobacterium pseudocatenulatum strain AF11-18

Gram-positiveRodAnaerobe

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Bifidobacteriales

Family

Bifidobacteriaceae

Genus

Bifidobacterium

Description

Bifidobacterium pseudocatenulatum strain AF11-18 is a Gram-positive, anaerobic, rod-shaped bacterium primarily found in the gastrointestinal tracts of adults and breastfed infants. It is part of the diverse gut microbiomes, contributing to the overall microbial composition in both adult and infant gut environments, including those of Vietnamese populations. This strain is characterized by the presence of flagella, which may aid in its motility within the gut environment. It has a single replicon, indicating a streamlined genomic organization, which can be beneficial for its adaptation to the anaerobic conditions typical of the gut. Bifidobacterium pseudocatenulatum has been associated with health effects, particularly in relation to pyogenic infections. This suggests a potential role in influencing host health and disease dynamics, although the specifics of this relationship warrant further investigation. Understanding the ecological role of Bifidobacterium pseudocatenulatum strain AF11-18 in the gut microbiota is crucial, as it may contribute to maintaining gut health and combating pathogenic organisms. Its presence in both adults and infants highlights its adaptability and importance in the microbial ecosystem, potentially offering insights into the development of gut health from infancy through adulthood.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderBifidobacteriales
FamilyBifidobacteriaceae
GenusBifidobacterium
SpeciesBifidobacterium pseudocatenulatum
Strainstrain AF11-18

Profile

Physiology
Gram staining propertiesPositive
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Bifidobacterium pseudocatenulatum strain AF11-18
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobe
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatgastrointestinal tracts of adults and breastfed infants; gut; gut microbiomes; infant gut; infant gut microbiota; Vietnamese gut microbiota
Biotic relationshipNot Available
Host(s)Homo sapiens
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Bifidobacterium pseudocatenulatum strain AF11-18 AF11-18.Scaf9,

Gene Summary

Adenine Count

496054 bp

Thymine Count

497345 bp

Guanine Count

634289 bp

Cytosine Count

640245 bp

Genome Length

2267953 bp

Protein-coding Genes

1748 genes

Non-Coding Genes

63 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
nudix hydrolaseDWV61_06880Not AvailableNegative1639325 - 163994823130.2
cca trna nucleotidyltransferaseDWV61_06885Not AvailablePositive1640061 - 164148254108.4
lytr family transcriptional regulatorDWV61_06890Not AvailableNegative1641719 - 164234222725.9
4-(cytidine 5'-diphospho)-2-c-methyl-d-erythritol kinaseDWV61_06895Not AvailableNegative1642386 - 164329431806.4
16s rrna (adenine(1518)-n(6)/adenine(1519)-n(6))- dimethyltransferase rsmaDWV61_06900Not AvailableNegative1643291 - 164422033430.8
duf348 domain-containing proteinDWV61_06905Not AvailableNegative1644294 - 164578453372.9
Trna-thrNot AvailableNot AvailablePositive1646058 - 1646134Not Available
disulfide bond formation protein dsbaDWV61_06915Not AvailableNegative1646288 - 164727136297.5
serine/threonine protein kinaseDWV61_06920Not AvailableNegative1647459 - 164955573556.5
beta-glucosidaseDWV61_06925Not AvailablePositive1649924 - 1652818105496.0

Displaying genes 1331 – 1340 of 1811 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
Pyogenic infectionsCausesPMC8557894

Displaying health effects 1 – 1 of 1 in total