Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Agathobacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Agathobacter |
| Species | Agathobacter rectalis |
| Strain | strain AF12-8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1031526 bp
Thymine Count
1015931 bp
Guanine Count
729510 bp
Cytosine Count
706943 bp
Genome Length
3484385 bp
Protein-coding Genes
2783 genes
Non-Coding Genes
112 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna alkylation repair protein | DWV78_10560 | Not Available | Negative | 2223065 - 2223805 | 29291.5 |
| shikimate kinase | DWV78_10570 | Not Available | Negative | 2224975 - 2225778 | 30452.8 |
| c4-dicarboxylate abc transporter | DWV78_10575 | Not Available | Negative | 2225966 - 2226967 | 37122.8 |
| trap transporter large permease | DWV78_10580 | Not Available | Negative | 2227173 - 2228462 | 45722.4 |
| trap transporter small permease | DWV78_10585 | Not Available | Negative | 2228463 - 2229080 | 24149.8 |
| type i 3-dehydroquinate dehydratase | DWV78_10590 | Not Available | Negative | 2229268 - 2230029 | 27674.7 |
| lysr family transcriptional regulator | DWV78_10605 | Not Available | Positive | 2232505 - 2233386 | 32883.3 |
| lysr family transcriptional regulator | DWV78_10610 | Not Available | Negative | 2233383 - 2234264 | 33473.4 |
| duf4160 domain-containing protein | DWV78_10625 | Not Available | Positive | 2238024 - 2238287 | 10034.0 |
| duf2442 domain-containing protein | DWV78_10630 | Not Available | Positive | 2238299 - 2238604 | 11369.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

