Bacteroides clarus strain AF14-27

Gram-negativeRodAnaerobe

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Bacteroidia

Order

Bacteroidales

Family

Bacteroidaceae

Genus

Bacteroides

Description

Bacteroides clarus strain AF14-27 is a Gram-negative, anaerobic bacterium characterized by its rod shape and the presence of flagella. This strain has been specifically identified as a member of the Bacteroides genus, which is known for its role in the human gut microbiome. The strain is notable for having a single replicon, which indicates a streamlined genomic structure that may contribute to its adaptability within its ecological niche. Primarily associated with Homo sapiens, Bacteroides clarus strain AF14-27 is part of the diverse microbial community residing in the human gastrointestinal tract. This community performs essential functions such as aiding in the digestion of complex carbohydrates, synthesizing vitamins, and maintaining gut health. The presence of flagella suggests that this strain has the ability to move, which may enhance its capability to colonize and thrive in the anaerobic conditions of the human gut environment. Understanding the characteristics of Bacteroides clarus strain AF14-27 can provide insights into its ecological role in the human microbiome. Its anaerobic nature and motility may influence its interactions with other microbial species and its overall impact on human health. Further research on this strain could elucidate its specific contributions to gut health and its potential implications in health and disease. The strain is cataloged under accession QRZG00000000.1, serving as a reference for future studies.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassBacteroidia
OrderBacteroidales
FamilyBacteroidaceae
GenusBacteroides
SpeciesBacteroides clarus
Strainstrain AF14-27

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Bacteroides clarus strain AF14-27
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobe
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatgut
Biotic relationshipNot Available
Host(s)Homo sapiens
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Bacteroides clarus strain AF14-27 AF14-27.Scaf104, whole genome

Gene Summary

Adenine Count

1208636 bp

Thymine Count

1159290 bp

Guanine Count

982789 bp

Cytosine Count

996410 bp

Genome Length

4347396 bp

Protein-coding Genes

3619 genes

Non-Coding Genes

89 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
16s ribosomal rnaNot AvailableNot AvailablePositive3507 - 5040Not Available
ragb/susd family nutrient uptake outer membrane proteinDWW09_00010Not AvailablePositive3611 - 515258107.0
duf4832 domain-containing proteinDWW09_00015Not AvailablePositive5175 - 661453518.1
5s ribosomal rnaNot AvailableNot AvailablePositive5698 - 5808Not Available
duf5009 domain-containing proteinDWW09_00020Not AvailablePositive6619 - 773742867.5
hypothetical proteinDWW09_00025Not AvailablePositive7757 - 952364643.8
gfo/idh/moca family oxidoreductaseDWW09_00030Not AvailableNegative9632 - 1076843012.6
fecr family proteinDWW09_00035Not AvailableNegative10755 - 1177138936.2
rna polymerase sigma-70 factorDWW09_00040Not AvailableNegative11779 - 1237523858.2
gfo/idh/moca family oxidoreductaseDWW09_00045Not AvailablePositive12712 - 1413654110.0

Displaying genes 41 – 50 of 3708 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.