Kingdom
Bacillati
Phylum
Bacillota
Class
Erysipelotrichia
Order
Erysipelotrichales
Family
Erysipelotrichaceae
Genus
Holdemanella
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Erysipelotrichia |
| Order | Erysipelotrichales |
| Family | Erysipelotrichaceae |
| Genus | Holdemanella |
| Species | Holdemanella biformis |
| Strain | strain AF15-20 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | feces |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
860672 bp
Thymine Count
854649 bp
Guanine Count
446221 bp
Cytosine Count
438063 bp
Genome Length
2601418 bp
Protein-coding Genes
2503 genes
Non-Coding Genes
103 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| methylenetetrahydrofolate--trna-(uracil(54)- c(5))-methyltransferase (fadh(2)-oxidizing) trmfo | DWW32_04580 | Not Available | Negative | 868117 - 869415 | 48443.2 |
| type i dna topoisomerase | DWW32_04585 | Not Available | Negative | 869415 - 871547 | 81221.1 |
| dna-protecting protein dpra | DWW32_04590 | Not Available | Negative | 871603 - 872334 | 27597.4 |
| ribonuclease hii | DWW32_04595 | Not Available | Negative | 872377 - 872985 | 23174.1 |
| ribosome biogenesis gtpase ylqf | DWW32_04600 | Not Available | Negative | 872978 - 873823 | 32212.4 |
| signal peptidase i | DWW32_04605 | Not Available | Negative | 873823 - 874488 | 25102.2 |
| 50s ribosomal protein l19 | DWW32_04610 | Not Available | Negative | 874571 - 874918 | 12984.9 |
| trna (guanosine(37)-n1)-methyltransferase trmd | DWW32_04615 | Not Available | Negative | 875037 - 875759 | 27515.1 |
| 16s rrna processing protein rimm | DWW32_04620 | Not Available | Negative | 875756 - 876244 | 18800.6 |
| kh domain-containing protein | DWW32_04625 | Not Available | Negative | 876282 - 876530 | 9261.43 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
