Kingdom
Bacillati
Phylum
Bacillota
Class
Erysipelotrichia
Order
Erysipelotrichales
Family
Erysipelotrichaceae
Genus
Holdemanella
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Erysipelotrichia |
| Order | Erysipelotrichales |
| Family | Erysipelotrichaceae |
| Genus | Holdemanella |
| Species | Holdemanella biformis |
| Strain | strain AF15-20 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | feces |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
860672 bp
Thymine Count
854649 bp
Guanine Count
446221 bp
Cytosine Count
438063 bp
Genome Length
2601418 bp
Protein-coding Genes
2503 genes
Non-Coding Genes
103 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gnat family n-acetyltransferase | DWW32_03920 | Not Available | Negative | 738581 - 738997 | 16171.4 |
| atp-dependent helicase | DWW32_03925 | Not Available | Positive | 739083 - 742247 | 124161.0 |
| 4-alpha-glucanotransferase | DWW32_03930 | Not Available | Positive | 742334 - 743803 | 57674.5 |
| prd domain-containing protein | DWW32_03935 | Not Available | Positive | 744092 - 746842 | 106115.0 |
| sugar phosphate isomerase/epimerase | DWW32_03940 | Not Available | Positive | 746829 - 747139 | 12356.8 |
| glycyl-radical enzyme activating protein | DWW32_03945 | Not Available | Negative | 747457 - 748398 | 35935.4 |
| formate c-acetyltransferase/glycerol dehydratase family glycyl radical enzyme | DWW32_03950 | Not Available | Negative | 748361 - 750667 | 86867.3 |
| deor/glpr transcriptional regulator | DWW32_03955 | Not Available | Negative | 750731 - 751453 | 27292.2 |
| sodium-dependent transporter | DWW32_03960 | Not Available | Positive | 751519 - 752820 | 47788.9 |
| phosphodiesterase | DWW32_03965 | Not Available | Negative | 752780 - 753325 | 20781.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
