Kingdom
Bacillati
Phylum
Bacillota
Class
Erysipelotrichia
Order
Erysipelotrichales
Family
Erysipelotrichaceae
Genus
Holdemanella
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Erysipelotrichia |
| Order | Erysipelotrichales |
| Family | Erysipelotrichaceae |
| Genus | Holdemanella |
| Species | Holdemanella biformis |
| Strain | strain AF15-20 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | feces |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
860672 bp
Thymine Count
854649 bp
Guanine Count
446221 bp
Cytosine Count
438063 bp
Genome Length
2601418 bp
Protein-coding Genes
2503 genes
Non-Coding Genes
103 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| n(4)-(beta-n-acetylglucosaminyl)-l-asparaginase | DWW32_03870 | Not Available | Positive | 729185 - 730144 | 35077.8 |
| m20/m25/m40 family metallo-hydrolase | DWW32_03875 | Not Available | Positive | 730146 - 731267 | 41809.2 |
| copper homeostasis protein cutc | DWW32_03880 | Not Available | Positive | 731260 - 731994 | 26987.2 |
| mate family efflux transporter | DWW32_03885 | Not Available | Negative | 732022 - 733296 | 46319.4 |
| hypothetical protein | DWW32_03890 | Not Available | Positive | 733316 - 733834 | 20480.6 |
| hypothetical protein | DWW32_03895 | Not Available | Positive | 733850 - 734032 | 7183.95 |
| oligoendopeptidase f | DWW32_03900 | Not Available | Positive | 734048 - 735829 | 68318.3 |
| atp-binding protein | DWW32_03905 | Not Available | Positive | 735903 - 736148 | 9623.57 |
| chorismate mutase | DWW32_03910 | Not Available | Positive | 736279 - 737352 | 40335.4 |
| aminotransferase class i/ii-fold pyridoxal phosphate-dependent enzyme | DWW32_03915 | Not Available | Positive | 737355 - 738584 | 45755.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
