Kingdom
Bacillati
Phylum
Bacillota
Class
Erysipelotrichia
Order
Erysipelotrichales
Family
Erysipelotrichaceae
Genus
Holdemanella
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Erysipelotrichia |
| Order | Erysipelotrichales |
| Family | Erysipelotrichaceae |
| Genus | Holdemanella |
| Species | Holdemanella biformis |
| Strain | strain AF15-20 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | feces |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
860672 bp
Thymine Count
854649 bp
Guanine Count
446221 bp
Cytosine Count
438063 bp
Genome Length
2601418 bp
Protein-coding Genes
2503 genes
Non-Coding Genes
103 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp-binding cassette domain-containing protein | DWW32_03710 | Not Available | Positive | 698871 - 699503 | 24004.3 |
| molybdate abc transporter substrate-binding protein | DWW32_03715 | Not Available | Positive | 699500 - 700276 | 27678.8 |
| molybdopterin-binding protein | DWW32_03720 | Not Available | Positive | 700278 - 701291 | 37192.8 |
| lysr family transcriptional regulator | DWW32_03725 | Not Available | Positive | 701288 - 701620 | 12494.0 |
| duf3343 domain-containing protein | DWW32_03730 | Not Available | Positive | 701613 - 701834 | 8458.48 |
| selenide, water dikinase seld | DWW32_03735 | Not Available | Positive | 701834 - 702850 | 37578.7 |
| sulfurtransferase-like selenium metabolism protein yedf | DWW32_03740 | Not Available | Positive | 702857 - 703450 | 22091.6 |
| putative selenium-dependent hydroxylase accessory protein yqec | DWW32_03750 | Not Available | Positive | 705315 - 706682 | 50737.8 |
| d-alanyl-d-alanine carboxypeptidase family protein | DWW32_03755 | Not Available | Positive | 706697 - 707491 | 30297.7 |
| sigma-70 family rna polymerase sigma factor | DWW32_03760 | Not Available | Positive | 707472 - 708071 | 23463.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
