Kingdom
Bacillati
Phylum
Bacillota
Class
Erysipelotrichia
Order
Erysipelotrichales
Family
Erysipelotrichaceae
Genus
Holdemanella
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Erysipelotrichia |
| Order | Erysipelotrichales |
| Family | Erysipelotrichaceae |
| Genus | Holdemanella |
| Species | Holdemanella biformis |
| Strain | strain AF15-20 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | feces |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
860672 bp
Thymine Count
854649 bp
Guanine Count
446221 bp
Cytosine Count
438063 bp
Genome Length
2601418 bp
Protein-coding Genes
2503 genes
Non-Coding Genes
103 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| succinate dehydrogenase | DWW32_03605 | Not Available | Positive | 681176 - 681487 | 11104.8 |
| duf1016 domain-containing protein | DWW32_03610 | Not Available | Positive | 681593 - 682633 | 40057.9 |
| hypothetical protein | DWW32_03615 | Not Available | Positive | 682626 - 683054 | 16703.5 |
| relaxase | DWW32_03620 | Not Available | Positive | 683108 - 684523 | 53677.4 |
| hypothetical protein | DWW32_03625 | Not Available | Positive | 684531 - 684782 | 9333.4 |
| xre family transcriptional regulator | DWW32_03630 | Not Available | Negative | 684747 - 685103 | 13606.6 |
| sensor histidine kinase | DWW32_03635 | Not Available | Negative | 685403 - 686767 | 51453.9 |
| dna-binding response regulator | DWW32_03640 | Not Available | Negative | 686764 - 687459 | 26070.8 |
| abc transporter atp-binding protein | DWW32_03645 | Not Available | Positive | 687618 - 688541 | 34054.4 |
| abc transporter permease | DWW32_03650 | Not Available | Positive | 688534 - 689337 | 29967.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
