Kingdom
Bacillati
Phylum
Bacillota
Class
Erysipelotrichia
Order
Erysipelotrichales
Family
Erysipelotrichaceae
Genus
Holdemanella
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Erysipelotrichia |
| Order | Erysipelotrichales |
| Family | Erysipelotrichaceae |
| Genus | Holdemanella |
| Species | Holdemanella biformis |
| Strain | strain AF15-20 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | feces |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
860672 bp
Thymine Count
854649 bp
Guanine Count
446221 bp
Cytosine Count
438063 bp
Genome Length
2601418 bp
Protein-coding Genes
2503 genes
Non-Coding Genes
103 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DWW32_03245 | Not Available | Positive | 604031 - 604579 | 21802.6 |
| abc transporter substrate-binding protein | DWW32_03250 | Not Available | Positive | 605020 - 605952 | 33634.3 |
| methionine abc transporter atp-binding protein | DWW32_03255 | Not Available | Positive | 606035 - 607000 | 36470.1 |
| abc transporter permease | DWW32_03260 | Not Available | Positive | 607003 - 607638 | 22690.8 |
| hypothetical protein | DWW32_03265 | Not Available | Positive | 607771 - 608076 | 12060.1 |
| putative hydroxymethylpyrimidine transporter cytx | DWW32_03275 | Not Available | Negative | 609768 - 610931 | 41657.6 |
| bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | DWW32_03280 | Not Available | Negative | 610928 - 611737 | 28581.2 |
| hypothetical protein | DWW32_03285 | Not Available | Negative | 612116 - 613378 | 50119.1 |
| abc transporter atp-binding protein | DWW32_03290 | Not Available | Positive | 613517 - 615154 | 62184.4 |
| xre family transcriptional regulator | DWW32_03295 | Not Available | Positive | 615247 - 616344 | 43048.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
