Kingdom
Bacillati
Phylum
Bacillota
Class
Erysipelotrichia
Order
Erysipelotrichales
Family
Erysipelotrichaceae
Genus
Holdemanella
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Erysipelotrichia |
| Order | Erysipelotrichales |
| Family | Erysipelotrichaceae |
| Genus | Holdemanella |
| Species | Holdemanella biformis |
| Strain | strain AF15-20 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | feces |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
860672 bp
Thymine Count
854649 bp
Guanine Count
446221 bp
Cytosine Count
438063 bp
Genome Length
2601418 bp
Protein-coding Genes
2503 genes
Non-Coding Genes
103 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| prd domain-containing protein | DWW32_03195 | Not Available | Negative | 595885 - 597849 | 76930.0 |
| acylphosphatase | DWW32_03200 | Not Available | Positive | 598127 - 598450 | 12439.0 |
| hypothetical protein | DWW32_03205 | Not Available | Negative | 598507 - 598893 | 14694.7 |
| toxin-antitoxin system hicb family antitoxin | DWW32_03210 | Not Available | Negative | 598903 - 599400 | 18565.2 |
| type ii toxin-antitoxin system hica family toxin | DWW32_03215 | Not Available | Negative | 599402 - 599665 | 10272.4 |
| transketolase family protein | DWW32_03220 | Not Available | Negative | 599834 - 600757 | 33530.6 |
| transketolase | DWW32_03225 | Not Available | Negative | 600754 - 601572 | 30215.6 |
| had family phosphatase | DWW32_03230 | Not Available | Negative | 601574 - 602461 | 34019.9 |
| l-ribulose-5-phosphate 3-epimerase | DWW32_03235 | Not Available | Negative | 602462 - 603310 | 32087.6 |
| l-ribulose-5-phosphate 4-epimerase | DWW32_03240 | Not Available | Negative | 603294 - 603536 | 8800.37 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
