Kingdom
Bacillati
Phylum
Bacillota
Class
Erysipelotrichia
Order
Erysipelotrichales
Family
Erysipelotrichaceae
Genus
Holdemanella
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Erysipelotrichia |
| Order | Erysipelotrichales |
| Family | Erysipelotrichaceae |
| Genus | Holdemanella |
| Species | Holdemanella biformis |
| Strain | strain AF15-20 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | feces |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
860672 bp
Thymine Count
854649 bp
Guanine Count
446221 bp
Cytosine Count
438063 bp
Genome Length
2601418 bp
Protein-coding Genes
2503 genes
Non-Coding Genes
103 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| excisionase | DWW32_03130 | Not Available | Positive | 586727 - 586930 | 8110.85 |
| site-specific integrase | DWW32_03135 | Not Available | Positive | 587012 - 588229 | 47024.5 |
| laci family transcriptional regulator | DWW32_03150 | Not Available | Negative | 589178 - 590173 | 37118.9 |
| hypothetical protein | DWW32_03155 | Not Available | Positive | 590467 - 590673 | 7635.45 |
| rok family protein | DWW32_03165 | Not Available | Negative | 590986 - 591876 | 31674.3 |
| ketose-bisphosphate aldolase | DWW32_03170 | Not Available | Negative | 591950 - 592819 | 31712.2 |
| class ii fructose-bisphosphate aldolase | DWW32_03175 | Not Available | Negative | 592842 - 593696 | 31543.7 |
| pts fructose transporter subunit iic | DWW32_03180 | Not Available | Negative | 593730 - 594821 | 37711.5 |
| pts fructose transporter subunit iib | DWW32_03185 | Not Available | Negative | 594850 - 595167 | 11392.9 |
| pts fructose transporter subunit iia | DWW32_03190 | Not Available | Negative | 595422 - 595871 | 16694.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
