Kingdom
Bacillati
Phylum
Bacillota
Class
Erysipelotrichia
Order
Erysipelotrichales
Family
Erysipelotrichaceae
Genus
Holdemanella
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Erysipelotrichia |
| Order | Erysipelotrichales |
| Family | Erysipelotrichaceae |
| Genus | Holdemanella |
| Species | Holdemanella biformis |
| Strain | strain AF15-20 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | feces |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
860672 bp
Thymine Count
854649 bp
Guanine Count
446221 bp
Cytosine Count
438063 bp
Genome Length
2601418 bp
Protein-coding Genes
2503 genes
Non-Coding Genes
103 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| site-specific integrase | DWW32_02865 | Not Available | Positive | 539134 - 540231 | 43168.3 |
| hypothetical protein | DWW32_02870 | Not Available | Positive | 540212 - 540544 | 12971.0 |
| aminoglycoside nucleotidyltransferase | DWW32_02875 | Not Available | Negative | 541240 - 541737 | 19190.7 |
| abc transporter atp-binding protein | DWW32_02880 | Not Available | Negative | 541822 - 543366 | 59312.0 |
| tnpv protein | DWW32_02885 | Not Available | Negative | 543820 - 544197 | 14664.7 |
| recombinase | DWW32_02890 | Not Available | Negative | 544224 - 545363 | 44322.5 |
| hypothetical protein | DWW32_02895 | Not Available | Negative | 545719 - 546873 | 43758.0 |
| hypothetical protein | DWW32_02900 | Not Available | Negative | 546863 - 547198 | 12417.9 |
| site-specific integrase | DWW32_02905 | Not Available | Negative | 547188 - 548279 | 42966.9 |
| lysr family transcriptional regulator | DWW32_02910 | Not Available | Negative | 548280 - 548468 | 7288.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
