Kingdom
Bacillati
Phylum
Bacillota
Class
Erysipelotrichia
Order
Erysipelotrichales
Family
Erysipelotrichaceae
Genus
Holdemanella
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Erysipelotrichia |
| Order | Erysipelotrichales |
| Family | Erysipelotrichaceae |
| Genus | Holdemanella |
| Species | Holdemanella biformis |
| Strain | strain AF15-20 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | feces |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
860672 bp
Thymine Count
854649 bp
Guanine Count
446221 bp
Cytosine Count
438063 bp
Genome Length
2601418 bp
Protein-coding Genes
2503 genes
Non-Coding Genes
103 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf3387 domain-containing protein | DWW32_02815 | Not Available | Negative | 529570 - 529896 | 12670.2 |
| type i restriction endonuclease subunit r | DWW32_02820 | Not Available | Negative | 529928 - 533056 | 121273.0 |
| hypothetical protein | DWW32_02825 | Not Available | Negative | 533072 - 533665 | 22449.1 |
| restriction endonuclease subunit s | DWW32_02830 | Not Available | Negative | 533704 - 534855 | 43851.9 |
| sam-dependent dna methyltransferase | DWW32_02835 | Not Available | Negative | 534852 - 536669 | 68403.3 |
| xre family transcriptional regulator | DWW32_02840 | Not Available | Negative | 536730 - 536948 | 7993.81 |
| hypothetical protein | DWW32_02845 | Not Available | Positive | 537272 - 537730 | 17958.4 |
| hypothetical protein | DWW32_02850 | Not Available | Negative | 537767 - 537994 | 9149.76 |
| type ii toxin-antitoxin system pemk/mazf family toxin | DWW32_02855 | Not Available | Positive | 538446 - 538814 | 14117.6 |
| dna-binding protein | DWW32_02860 | Not Available | Positive | 538944 - 539153 | 8058.66 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
