Kingdom
Bacillati
Phylum
Bacillota
Class
Erysipelotrichia
Order
Erysipelotrichales
Family
Erysipelotrichaceae
Genus
Holdemanella
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Erysipelotrichia |
| Order | Erysipelotrichales |
| Family | Erysipelotrichaceae |
| Genus | Holdemanella |
| Species | Holdemanella biformis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | feces |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Holdemanella biformis strain AF15-20
Accession NumberQRYQ00000000.1
Gene Summary
Adenine Count
860672 bp
Thymine Count
854649 bp
Guanine Count
446221 bp
Cytosine Count
438063 bp
Genome Length
2601418 bp
Protein-coding Genes
2503 genes
Non-Coding Genes
103 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| sigma-70 family rna polymerase sigma factor | DWW32_02505 | Not Available | + | 475630 - 476061 | 17045.5 |
| helix-turn-helix domain-containing protein | DWW32_02510 | Not Available | + | 476051 - 476290 | 9326.33 |
| duf3173 domain-containing protein | DWW32_02520 | Not Available | + | 476785 - 476979 | 7215.81 |
| site-specific integrase | DWW32_02525 | Not Available | + | 477015 - 478205 | 45805.3 |
| winged helix-turn-helix transcriptional regulator | DWW32_02530 | Not Available | - | 478518 - 478748 | 8591.5 |
| hypothetical protein | DWW32_02540 | Not Available | - | 479304 - 480659 | 52261.0 |
| hypothetical protein | DWW32_02545 | Not Available | - | 480671 - 481681 | 38866.3 |
| abc transporter atp-binding protein | DWW32_02550 | Not Available | - | 481767 - 482645 | 33100.2 |
| hypothetical protein | DWW32_02555 | Not Available | - | 483572 - 484855 | 49727.7 |
| plasmid mobilization relaxosome protein mobc | DWW32_02560 | Not Available | - | 484842 - 485177 | 12882.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.