Kingdom
Bacillati
Phylum
Bacillota
Class
Erysipelotrichia
Order
Erysipelotrichales
Family
Erysipelotrichaceae
Genus
Holdemanella
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Erysipelotrichia |
| Order | Erysipelotrichales |
| Family | Erysipelotrichaceae |
| Genus | Holdemanella |
| Species | Holdemanella biformis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | feces |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Holdemanella biformis strain AF15-20
Accession NumberQRYQ00000000.1
Gene Summary
Adenine Count
860672 bp
Thymine Count
854649 bp
Guanine Count
446221 bp
Cytosine Count
438063 bp
Genome Length
2601418 bp
Protein-coding Genes
2503 genes
Non-Coding Genes
103 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| pts fructose transporter subunit iia | DWW32_02000 | Not Available | + | 388156 - 388587 | 15190.0 |
| m20 family peptidase | DWW32_02005 | Not Available | + | 388685 - 389851 | 41731.6 |
| pts n-acetylgalactosamine transporter subunit iib | DWW32_02010 | Not Available | + | 390090 - 390566 | 17411.2 |
| pts sugar transporter subunit iic | DWW32_02015 | Not Available | + | 390590 - 391381 | 27067.9 |
| pts system mannose/fructose/sorbose family transporter subunit iid | DWW32_02020 | Not Available | + | 391371 - 392246 | 31897.6 |
| hypothetical protein | DWW32_02025 | Not Available | + | 392390 - 392971 | 23006.6 |
| hypothetical protein | DWW32_02030 | Not Available | + | 392981 - 393529 | 21187.5 |
| tagatose-bisphosphate aldolase | DWW32_02035 | Not Available | - | 393597 - 394922 | 49380.5 |
| glucosamine-6-phosphate deaminase | DWW32_02040 | Not Available | + | 395112 - 395831 | 26293.2 |
| srtb family sortase | DWW32_02045 | Not Available | + | 395901 - 396650 | 29070.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.