Kingdom
Bacillati
Phylum
Bacillota
Class
Erysipelotrichia
Order
Erysipelotrichales
Family
Erysipelotrichaceae
Genus
Holdemanella
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Erysipelotrichia |
| Order | Erysipelotrichales |
| Family | Erysipelotrichaceae |
| Genus | Holdemanella |
| Species | Holdemanella biformis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | feces |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Holdemanella biformis strain AF15-20
Accession NumberQRYQ00000000.1
Gene Summary
Adenine Count
860672 bp
Thymine Count
854649 bp
Guanine Count
446221 bp
Cytosine Count
438063 bp
Genome Length
2601418 bp
Protein-coding Genes
2503 genes
Non-Coding Genes
103 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| duf3793 family protein | DWW32_01640 | Not Available | - | 313123 - 313656 | 21166.3 |
| class ib ribonucleoside-diphosphate reductase assembly flavoprotein nrdi | DWW32_01645 | Not Available | - | 313659 - 314009 | 12543.5 |
| mate family efflux transporter | DWW32_01650 | Not Available | + | 314107 - 315489 | 50666.7 |
| ammonium transporter | DWW32_01655 | Not Available | + | 315600 - 317288 | 59806.3 |
| hypothetical protein | DWW32_01660 | Not Available | - | 317370 - 318191 | 32378.6 |
| hypothetical protein | DWW32_01665 | Not Available | - | 318196 - 319200 | 39494.6 |
| pyridoxamine 5'-phosphate oxidase family protein | DWW32_01670 | Not Available | - | 319256 - 319732 | 18364.2 |
| alpha/beta hydrolase | DWW32_01675 | Not Available | - | 319777 - 320700 | 34633.1 |
| pap2 family protein | DWW32_01680 | Not Available | - | 320779 - 321318 | 20843.3 |
| creatininase family protein | DWW32_01685 | Not Available | + | 321342 - 322091 | 28061.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.