Kingdom
Bacillati
Phylum
Bacillota
Class
Erysipelotrichia
Order
Erysipelotrichales
Family
Erysipelotrichaceae
Genus
Holdemanella
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Erysipelotrichia |
| Order | Erysipelotrichales |
| Family | Erysipelotrichaceae |
| Genus | Holdemanella |
| Species | Holdemanella biformis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | feces |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Holdemanella biformis strain AF15-20
Accession NumberQRYQ00000000.1
Gene Summary
Adenine Count
860672 bp
Thymine Count
854649 bp
Guanine Count
446221 bp
Cytosine Count
438063 bp
Genome Length
2601418 bp
Protein-coding Genes
2503 genes
Non-Coding Genes
103 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| sensor domain-containing diguanylate cyclase | DWW32_01390 | Not Available | - | 265100 - 266539 | 55182.9 |
| iron-only hydrogenase system regulator | DWW32_01395 | Not Available | + | 266777 - 267034 | 9221.29 |
| [fefe] hydrogenase h-cluster radical sam maturase hyde | DWW32_01400 | Not Available | + | 267027 - 268070 | 39385.4 |
| [fefe] hydrogenase h-cluster radical sam maturase hydg | DWW32_01405 | Not Available | + | 268087 - 269535 | 54946.4 |
| [fefe] hydrogenase h-cluster maturation gtpase hydf | DWW32_01410 | Not Available | + | 269495 - 270709 | 44543.6 |
| aminopeptidase | DWW32_01415 | Not Available | + | 270711 - 271526 | 30343.2 |
| hypothetical protein | DWW32_01420 | Not Available | + | 271803 - 272702 | 35105.6 |
| hypothetical protein | DWW32_01425 | Not Available | + | 272760 - 272993 | 8703.74 |
| sodium:proton antiporter | DWW32_01430 | Not Available | + | 273156 - 274334 | 42191.6 |
| type iii pantothenate kinase | DWW32_01435 | Not Available | - | 274336 - 275103 | 27908.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.