Kingdom
Bacillati
Phylum
Bacillota
Class
Erysipelotrichia
Order
Erysipelotrichales
Family
Erysipelotrichaceae
Genus
Holdemanella
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Erysipelotrichia |
| Order | Erysipelotrichales |
| Family | Erysipelotrichaceae |
| Genus | Holdemanella |
| Species | Holdemanella biformis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | feces |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Holdemanella biformis strain AF15-20
Accession NumberQRYQ00000000.1
Gene Summary
Adenine Count
860672 bp
Thymine Count
854649 bp
Guanine Count
446221 bp
Cytosine Count
438063 bp
Genome Length
2601418 bp
Protein-coding Genes
2503 genes
Non-Coding Genes
103 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hd domain-containing protein | DWW32_01290 | Not Available | + | 235782 - 237665 | 73799.4 |
| cna b-type domain-containing protein | DWW32_01295 | Not Available | + | 237713 - 245620 | 277857.0 |
| isopeptide-forming domain-containing fimbrial protein | DWW32_01300 | Not Available | + | 245654 - 247189 | 55319.0 |
| class c sortase | DWW32_01305 | Not Available | + | 247255 - 248118 | 32150.4 |
| hypothetical protein | DWW32_01310 | Not Available | + | 248115 - 248801 | 25580.7 |
| abi family protein | DWW32_01315 | Not Available | + | 249272 - 250180 | 34705.2 |
| low molecular weight phosphotyrosine protein phosphatase | DWW32_01320 | Not Available | + | 250560 - 250988 | 16575.6 |
| php domain-containing protein | DWW32_01325 | Not Available | + | 250985 - 251776 | 30230.8 |
| crp/fnr family transcriptional regulator | DWW32_01330 | Not Available | - | 251769 - 252323 | 21291.8 |
| 4fe-4s dicluster domain-containing protein | DWW32_01335 | Not Available | + | 252408 - 253103 | 25341.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.