Kingdom
Bacillati
Phylum
Bacillota
Class
Erysipelotrichia
Order
Erysipelotrichales
Family
Erysipelotrichaceae
Genus
Holdemanella
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Erysipelotrichia |
| Order | Erysipelotrichales |
| Family | Erysipelotrichaceae |
| Genus | Holdemanella |
| Species | Holdemanella biformis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | feces |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Holdemanella biformis strain AF15-20
Accession NumberQRYQ00000000.1
Gene Summary
Adenine Count
860672 bp
Thymine Count
854649 bp
Guanine Count
446221 bp
Cytosine Count
438063 bp
Genome Length
2601418 bp
Protein-coding Genes
2503 genes
Non-Coding Genes
103 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| pts mannose/fructose/sorbose transporter subunit iib | DWW32_13065 | Not Available | + | 2554172 - 2554642 | 17212.0 |
| pts sugar transporter subunit iic | DWW32_13070 | Not Available | + | 2554673 - 2555446 | 27289.1 |
| pts system mannose/fructose/sorbose family transporter subunit iid | DWW32_13075 | Not Available | + | 2555433 - 2556254 | 29995.4 |
| sis domain-containing protein | DWW32_13080 | Not Available | + | 2556263 - 2557279 | 39391.9 |
| is110 family transposase | DWW32_13085 | Not Available | - | 2557474 - 2558055 | 22022.9 |
| glycosyltransferase | DWW32_13105 | Not Available | - | 2559850 - 2561013 | 44773.7 |
| glycosyltransferase family 2 protein | DWW32_13110 | Not Available | - | 2561035 - 2561886 | 33007.9 |
| lipopolysaccharide biosynthesis protein | DWW32_13115 | Not Available | - | 2561888 - 2563126 | 46870.3 |
| glycosyltransferase | DWW32_13120 | Not Available | - | 2563116 - 2563916 | 30961.0 |
| duf2304 domain-containing protein | DWW32_13125 | Not Available | - | 2563921 - 2564283 | 13348.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.