Kingdom
Bacillati
Phylum
Bacillota
Class
Erysipelotrichia
Order
Erysipelotrichales
Family
Erysipelotrichaceae
Genus
Holdemanella
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Erysipelotrichia |
| Order | Erysipelotrichales |
| Family | Erysipelotrichaceae |
| Genus | Holdemanella |
| Species | Holdemanella biformis |
| Strain | strain AF15-20 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | feces |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
860672 bp
Thymine Count
854649 bp
Guanine Count
446221 bp
Cytosine Count
438063 bp
Genome Length
2601418 bp
Protein-coding Genes
2503 genes
Non-Coding Genes
103 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| site-specific integrase | DWW32_12800 | Not Available | Positive | 2500401 - 2501759 | 52377.5 |
| duf1016 domain-containing protein | DWW32_12805 | Not Available | Negative | 2502342 - 2503376 | 40666.8 |
| hypothetical protein | DWW32_12810 | Not Available | Negative | 2503628 - 2504005 | 14582.3 |
| s58 family peptidase | DWW32_12815 | Not Available | Positive | 2504577 - 2505527 | 34340.1 |
| had family hydrolase | DWW32_12820 | Not Available | Positive | 2505500 - 2506246 | 29074.4 |
| u32 family peptidase | DWW32_12825 | Not Available | Positive | 2506498 - 2507361 | 33323.9 |
| u32 family peptidase | DWW32_12830 | Not Available | Positive | 2507354 - 2508556 | 45131.3 |
| proline--trna ligase | DWW32_12835 | Not Available | Positive | 2508575 - 2510269 | 64013.7 |
| hypothetical protein | DWW32_12840 | Not Available | Positive | 2510364 - 2512067 | 64814.5 |
| bax inhibitor (bi)-1/ycca family protein | DWW32_12845 | Not Available | Positive | 2512069 - 2512779 | 26144.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
