Kingdom
Bacillati
Phylum
Bacillota
Class
Erysipelotrichia
Order
Erysipelotrichales
Family
Erysipelotrichaceae
Genus
Holdemanella
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Erysipelotrichia |
| Order | Erysipelotrichales |
| Family | Erysipelotrichaceae |
| Genus | Holdemanella |
| Species | Holdemanella biformis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | feces |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Holdemanella biformis strain AF15-20
Accession NumberQRYQ00000000.1
Gene Summary
Adenine Count
860672 bp
Thymine Count
854649 bp
Guanine Count
446221 bp
Cytosine Count
438063 bp
Genome Length
2601418 bp
Protein-coding Genes
2503 genes
Non-Coding Genes
103 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| pts system mannose/fructose/sorbose family transporter subunit iid | DWW32_12695 | Not Available | - | 2480738 - 2481502 | 28146.2 |
| pts mannose/fructose/sorbose transporter subunit iic | DWW32_12700 | Not Available | - | 2481512 - 2482288 | 27667.0 |
| hypothetical protein | DWW32_12705 | Not Available | - | 2482300 - 2482578 | 10758.2 |
| duf1891 domain-containing protein | DWW32_12710 | Not Available | - | 2482882 - 2482992 | 4339.45 |
| ggdef domain-containing protein | DWW32_12715 | Not Available | + | 2482972 - 2484135 | 44666.1 |
| hypothetical protein | DWW32_12720 | Not Available | - | 2484198 - 2484380 | 6915.85 |
| methionine--trna ligase | DWW32_12725 | Not Available | - | 2484380 - 2486305 | 73369.7 |
| php domain-containing protein | DWW32_12730 | Not Available | - | 2486582 - 2488222 | 62919.9 |
| hypothetical protein | DWW32_12735 | Not Available | - | 2488156 - 2489643 | 55347.6 |
| 1-deoxy-d-xylulose-5-phosphate reductoisomerase | DWW32_12740 | Not Available | - | 2489695 - 2490831 | 42279.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.